Trouble pip install Geopandas : Forums : PythonAnywhere

Trouble pip install Geopandas

Hello - I'm trying to install Geopandas, but I end up getting an error saying that permission is denied:

14:56 ~ $ pip install geopandas
Collecting geopandas
  Downloading geopandas-0.2.1-py2.py3-none-any.whl (199kB)
    100% |████████████████████████████████| 204kB 1.9MB/s 
Collecting descartes (from geopandas)
  Downloading descartes-1.1.0-py2-none-any.whl
Requirement already satisfied (use --upgrade to upgrade): pyproj in /usr/local/lib/python2.7/dist-packages (from geopandas)
Requirement already satisfied (use --upgrade to upgrade): pandas in /usr/local/lib/python2.7/dist-packages (from geopandas)
Requirement already satisfied (use --upgrade to upgrade): fiona in /usr/local/lib/python2.7/dist-packages (from geopandas)
Requirement already satisfied (use --upgrade to upgrade): shapely in /usr/local/lib/python2.7/dist-packages (from geopandas)
Requirement already satisfied (use --upgrade to upgrade): matplotlib in /usr/local/lib/python2.7/dist-packages (from descartes->geopandas)
Requirement already satisfied (use --upgrade to upgrade): pytz>=2011k in /usr/local/lib/python2.7/dist-packages (from pandas->geopandas)
Requirement already satisfied (use --upgrade to upgrade): python-dateutil in /usr/local/lib/python2.7/dist-packages (from pandas->geopandas)
Requirement already satisfied (use --upgrade to upgrade): numpy>=1.7.0 in /usr/local/lib/python2.7/dist-packages (from pandas->geopandas)
Requirement already satisfied (use --upgrade to upgrade): click-plugins in /usr/local/lib/python2.7/dist-packages (from fiona->geopandas)
Requirement already satisfied (use --upgrade to upgrade): munch in /usr/local/lib/python2.7/dist-packages (from fiona->geopandas)
Requirement already satisfied (use --upgrade to upgrade): six in /usr/local/lib/python2.7/dist-packages (from fiona->geopandas)
Requirement already satisfied (use --upgrade to upgrade): cligj in /usr/local/lib/python2.7/dist-packages (from fiona->geopandas)
Requirement already satisfied (use --upgrade to upgrade): cycler in /usr/local/lib/python2.7/dist-packages (from matplotlib->descartes->geopandas)
Requirement already satisfied (use --upgrade to upgrade): pyparsing!=2.0.4,>=1.5.6 in /usr/local/lib/python2.7/dist-packages (from matplotlib->descartes->ge
opandas)
Requirement already satisfied (use --upgrade to upgrade): click>=3.0 in /usr/local/lib/python2.7/dist-packages (from click-plugins->fiona->geopandas)
Installing collected packages: descartes, geopandas
Exception:
Traceback (most recent call last):
  File "/usr/local/lib/python2.7/dist-packages/pip/basecommand.py", line 215, in main
    status = self.run(options, args)
  File "/usr/local/lib/python2.7/dist-packages/pip/commands/install.py", line 317, in run
    prefix=options.prefix_path,
  File "/usr/local/lib/python2.7/dist-packages/pip/req/req_set.py", line 742, in install
    **kwargs
  File "/usr/local/lib/python2.7/dist-packages/pip/req/req_install.py", line 831, in install
    self.move_wheel_files(self.source_dir, root=root, prefix=prefix)
  File "/usr/local/lib/python2.7/dist-packages/pip/req/req_install.py", line 1032, in move_wheel_files
    isolated=self.isolated,
  File "/usr/local/lib/python2.7/dist-packages/pip/wheel.py", line 346, in move_wheel_files
    clobber(source, lib_dir, True)
  File "/usr/local/lib/python2.7/dist-packages/pip/wheel.py", line 317, in clobber
    ensure_dir(destdir)
  File "/usr/local/lib/python2.7/dist-packages/pip/utils/__init__.py", line 83, in ensure_dir
    os.makedirs(path)
  File "/usr/lib/python2.7/os.py", line 157, in makedirs
    mkdir(name, mode)
OSError: [Errno 13] Permission denied: '/usr/local/lib/python2.7/dist-packages/descartes'

Any help would be appreciated.

wxbdm | 8 posts | July 18, 2017, 3:11 p.m. | permalink

https://help.pythonanywhere.com/pages/InstallingNewModules

harry | 2710 posts | PythonAnywhere staff | July 18, 2017, 3:28 p.m. | permalink

Classic error! You may always install modules but do so locally: pip install module --user

deleted-user-288300 | 14 posts | July 19, 2017, 12:15 p.m. | permalink

Hello, Im also trying to install geopandas(pip3.7 install geopandas). But I get an error form pyproj:

Complete output from command python setup.py egg_info: proj executable not found. Please set the PROJ_DIR variable. For more information see: https://pyproj4.github.io/pyproj/stable/installation.html

Then I follow the instructions of that site and set:

export PROJ_DIR=/usr/local/lib

export PROJ_LIBDIR=/usr/local/lib

export PROJ_INCDIR=/usr/local/lib

Then I get the error:

FileNotFoundError: [Errno 2] No such file or directory: '/usr/local/lib/bin/proj': '/usr/local/lib/bin/proj'

How can I install pyproj which is a prerequisite of geopandas?

SpyrosT93B | 6 posts | April 5, 2021, 2:23 p.m. | permalink

What do you get if you run

pip3.7 install --user pyproj

...?

If that works, then you'd need to set the environment variables to point to your private installation of pyproj -- the commands would be the same, but with /usr/local/ replaced with $HOME/.local/

giles | 10031 posts | PythonAnywhere staff | April 5, 2021, 4:15 p.m. | permalink

pip3.7 install --user pyproj

then I get the error: proj executable not found. Please set the PROJ_DIR variable. For more information see: https://pyproj4.github.io/pyproj/stable/installation.html

export PROJ_DIR=$HOME/.local/lib

export PROJ_LIBDIR=$HOME/.local/lib

export PROJ_INCDIR=$HOME/.local/lib

pip3.7 install --user pyproj

then I get the error: FileNotFoundError: [Errno 2] No such file or directory: '/home/SpyrosT93B/.local/lib/bin/proj': '/home/SpyrosT93B/.local/lib/bin/proj'

SpyrosT93B | 6 posts | April 6, 2021, 4:46 p.m. | permalink

Try changing PROJ_DIR to $HOME/.local/ -- that looks like it might help.

giles | 10031 posts | PythonAnywhere staff | April 6, 2021, 6 p.m. | permalink

export PROJ_DIR=$HOME/.local/

export PROJ_LIBDIR=$HOME/.local/

export PROJ_INCDIR=$HOME/.local/

pip3.7 install --user pyproj

then I get the error: FileNotFoundError: [Errno 2] No such file or directory: '/home/SpyrosT93B/.local/bin/proj': '/home/SpyrosT93B/.local/bin/proj'

I have my console 19687227 open. I dont know if its posible for you to look in it to see all the details.

SpyrosT93B | 6 posts | April 7, 2021, 11:04 a.m. | permalink

Command "python setup.py egg_info" failed with error code 1 in /tmp/pip-install-tz1dr8xk/pyproj/ that comes in red at the bottom

SpyrosT93B | 6 posts | April 7, 2021, 11:07 a.m. | permalink

proj_dir and proj_libdir etc are different paths. try just setting proj_dir and not setting anything else (the rest should work by default)

Giles suggested changing proj_dir but leaving the rest.

conrad | 4137 posts | PythonAnywhere staff | April 7, 2021, 1:42 p.m. | permalink

when is set only proj_dir:

15:52 ~ $ export PROJ_DIR=$HOME/.local/
15:53 ~ $ pip3.7 install --user pyproj
Looking in links: /usr/share/pip-wheels
Collecting pyproj
  Using cached https://files.pythonhosted.org/packages/2c/12/7a8cca32506747c05ffd5c6ba556cf8435754af0939906cbcc7fa5802ea3/pyproj-3.0.1.tar.gz
  Installing build dependencies ... done
    Complete output from command python setup.py egg_info:
    PROJ_DIR is set, using existing PROJ installation..

    ERROR: PROJ_INCDIR dir not found. Please set PROJ_INCDIR.

    ----------------------------------------
Command "python setup.py egg_info" failed with error code 1 in /tmp/pip-install-r7z4oz7u/pyproj/
15:55 ~ $

SpyrosT93B | 6 posts | April 7, 2021, 3:59 p.m. | permalink

Looks like you need to set PROJ_INCDIR if the includes directory is not inside the PROJ directory. See Installation — pyproj 3.0.1 documentation

fjl | 1874 posts | PythonAnywhere staff | April 8, 2021, 8:57 a.m. | permalink

Set it to where?

SpyrosT93B | 6 posts | April 8, 2021, 12:58 p.m. | permalink

This is the path to the PROJ include directory. If not set, it assumes it is the includes directory inside the PROJ directory.

So I assume it should be set to where include directory is located for the PROJ.

pafk | 655 posts | PythonAnywhere staff | April 8, 2021, 1:54 p.m. | permalink